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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs1165165 chr6:25862466 C/T SLC17A1 chr6:25783125-25832287:- 0.58 5.11 4.67E-6 Box Plot
ACC rs11673075 chr19:42068648 A/G CEACAM21 chr19:42055886-42093197:+ 0.8 6.43 3.95E-8 Box Plot
ACC rs11674510 chr2:114462957 C/T DDX11L2 chr2:114356613-114358838:- 0.76 5.77 4.37E-7 Box Plot
ACC rs116809535 chr7:64970341 G/T INTS4L1 chr7:64601603-64694600:+ 0.67 5.05 5.79E-6 Box Plot
ACC rs11683107 chr2:99759235 T/A TSGA10 chr2:99613724-99771427:- 0.57 5.64 7.06E-7 Box Plot
ACC rs11683188 chr2:99724512 T/C TSGA10 chr2:99613724-99771427:- 0.56 5.47 1.29E-6 Box Plot
ACC rs11685171 chr2:114462814 G/A DDX11L2 chr2:114356613-114358838:- 0.76 5.77 4.37E-7 Box Plot
ACC rs11685759 chr2:99766217 T/C TSGA10 chr2:99613724-99771427:- 0.56 5.5 1.15E-6 Box Plot
ACC rs11688004 chr2:99735052 G/T TSGA10 chr2:99613724-99771427:- 0.56 5.47 1.29E-6 Box Plot
ACC rs116899407 chr7:76322384 A/T POMZP3 chr7:76239303-76256578:- 0.98 5.88 2.98E-7 Box Plot
ACC rs11692336 chr2:99740606 T/C TSGA10 chr2:99613724-99771427:- 0.56 5.47 1.29E-6 Box Plot
ACC rs11692669 chr2:99750346 C/A TSGA10 chr2:99613724-99771427:- 0.57 5.64 7.06E-7 Box Plot
ACC rs11693427 chr2:99763326 G/A TSGA10 chr2:99613724-99771427:- 0.56 5.5 1.15E-6 Box Plot
ACC rs116949271 chr7:76342220 T/C POMZP3 chr7:76239303-76256578:- 0.86 6.02 1.8E-7 Box Plot
ACC rs11695751 chr2:99708247 A/C TSGA10 chr2:99613724-99771427:- 0.55 5.26 2.73E-6 Box Plot